Eastern filbert blight (EFB) disease caused by the fungal pathogen Anisogramma anomala (Peck) E. Müller is a major threat to Oregon’s hazelnut (Corylus avellana) industry. The Oregon State University (OSU) hazelnut breeding program has used ‘Gasaway’ as a source of resistance in many releases. Cultivars with ‘Gasaway’ resistance mapped to linkage group 6 (LG6) including ‘Jefferson’ and ‘McDonald’ have been extensively planted throughout Oregon’s Willamette Valley over the past decade. However ,‘Jefferson’ and ‘McDonald’ have exhibited small cankers in commercial orchards under high disease pressure. In New Jersey, cultivars with ‘Gasaway’ resistance develop large cankers. Thus, there are concerns about the long-term durability of ‘Gasaway’ resistance and the sustainability of Oregon’s hazelnut industry. The disease is also a main limiting factor to commercial hazelnut production in the eastern USA. New sources of resistance would be interesting, and a few major resistance genes have been mapped to LG7. Four populations were developed for fine mapping the LG7 resistance region using the ‘Ratoli’ (from Spain) and OSU 1166.123 (from Sochi, Russia) resistance sources. SSRs narrowed the resistance region to < 20 cM, and recombinant individuals were identified using 4-5 SSR loci within the region. Recombinants were inoculated with Anisogramma anomala in the greenhouse and in the field, and disease was evaluated 18 months later. A set of 22 new SSR markers were developed from di- and tri-nucleotide repeats between the flanking markers in the ‘Jefferson’ genome (v4). SSR markers were characterized using a diversity panel of 50 hazelnut accessions. To develop KASP/PACE primers for SNPs in the region, an initial set of 3000 SNPs was reduced to 100 using a SNP array. High density genetic linkage maps with new SSR and KASP markers were constructed for all four mapping populations. The results of this study will aid marker-assisted selection and the breeding of EFB-resistant cultivars with these new sources, and facilitate the pyramiding of R-genes in a single clonal selection for more durable resistance.
